http://precedings.nature.com/tags/wikis Recently posted documents tagged with 'wikis' Nature Publishing Group en Nature Precedings http://precedings.nature.com/images/header_logo.gif http://precedings.nature.com http://dx.doi.org/10.1038/npre.2009.3115.1 Biologists typically use knowledge represented as pathways to better understand the results of genomics experiments. Through integration of data from different omics techniques with what we already know, statistical evaluation and subsequent data visualization the results often start to make sense. An important problem is that we often do not have the relevant pathways, or they may be incomplete or not suitable for usage by analytical tools. Wikipathways is meant to be an answer to the problems described above. It uses mediawiki technology and dedicated open source java code to allow biologists to edit pathway content on the web. We assist this process through the development of helpful software like a Diff tool, Go and KEGG converters, portal mechanism, webservice and pathway extension through automated suggestions. http://dx.doi.org/10.1038/npre.2009.3115.1 Tue, 21 Apr 2009 17:07:45 UTC Community curation on WikiPathways: How we assist knowledge collection doi:10.1038/npre.2009.3115.1 2009-04-21 Chris Evelo Nature Precedings 2009-04-21T17:07:45Z Presentation Genetics & Genomics Bioinformatics http://creativecommons.org/licenses/by/3.0/ http://dx.doi.org/10.1038/npre.2007.39.1 The first half is a summary of how the Bradley group at Drexel University is doing Open Notebook Science with the UsefulChem project to synthesize and test novel anti-malarial compounds. Graduate student Dave Strumfels’ code to compute kinetics from JCAMP NMR reaction profiles is then highlighted. Finally screenshots are shown of a building on Nature Island in Second Life where Beth Ritter-Guth and Eloise Pasteur have helped to set up a poster room with NMR spectra, molecules and an organic chemistry quiz that can be activated by clicking on an obelisk. http://dx.doi.org/10.1038/npre.2007.39.1 Tue, 12 Jun 2007 09:47:27 UTC Open Notebook Science Using Blogs and Wikis doi:10.1038/npre.2007.39.1 2007-06-12 Jean-Claude Bradley Nature Precedings 2007-06-12T09:47:27Z Presentation Chemistry http://creativecommons.org/licenses/by/2.5/