Submissions tagged with natural language processing
(6 documents)
Towards Context Driven Modularization of Large Biomedical Ontologies
Formal knowledge about human anatomy, radiology or diseases is necessary to support clinical applications such as medical image search. This machine processable knowledge can be acquired from biome…
Received 30 July 2009 16:26 UTC; Posted 30 July 2009
Posted to: Bioinformatics
Towards Context Driven Modularization of Large Biomedical Ontologies
Formal knowledge about human anatomy, radiology or diseases is necessary to support clinical applications such as medical image search. This machine processable knowledge can be acquired from biome…
Received 30 July 2009 16:45 UTC; Posted 30 July 2009
Posted to: Bioinformatics
Using Textpresso for Information Retrieval, Fact Extraction
Ten years ago WormBase1 started as a repository for sequence data for the modelorganism Caenorhabditis elegans and has since striven to include the curation of allgenetic and molecular data p…
Received 01 June 2009 17:44 UTC; Posted 02 June 2009
Posted to: Genetics & Genomics, Bioinformatics
UIMA in the Biocuration Workflow: A coherent framework for cooperation between biologists and computational linguists
As collaborating partners, Barcelona Media Innovation Centre and GRIB (Universitat Pompeu Fabra) seek to combine strengths from Computational Linguistics and Biomedicine to produce a robust Text Mi…
Received 24 April 2009 16:05 UTC; Posted 24 April 2009
Posted to: Bioinformatics
Performance of the Charniak-Lease parser on biological text using different training corpora
POS tagging is used as the first step in many NLP workflows, although the accuracy of tag assignment frequently goes unchecked. We hypothesize that changing the training corpora for a parser will a…
Received 18 September 2008 15:39 UTC; Posted 18 September 2008
Posted to: Bioinformatics
Identifying Data Sharing in Biomedical Literature
Many policies and projects now encourage investigators to share their raw research data with other scientists. Unfortunately, it is difficult to measure the effectiveness of these initiatives becau…
Received 04 August 2008 19:09 UTC; Posted 04 August 2008
Posted to: Bioinformatics
