Submissions tagged with microarray
(18 documents)
Annotation-based meta-analysis of microarray experiments
We are developing software applications to perform meta-analysis of microarray experiments based on standardized experiment annotations aiming to identify similar experiments and cluster experiment…
Received 06 August 2009 19:26 UTC; Posted 06 August 2009
Posted to: Bioinformatics
A Drosophila systems model of withdrawal from chronic pentylenetetrazole relevant in post-epileptogenesis
Rodent kindling induced by pentylenetetrazole (PTZ) is an established model of epileptogenesis and antiepileptic drug (AED) testing. Recently, a Drosophila systems model has been described in which…
Received 21 July 2009 16:19 UTC; Posted 21 July 2009
Posted to: Genetics & Genomics, Neuroscience, Pharmacology, Bioinformatics
A novel Drosophila transcriptomic and behavioral model detects potassium chloride with therapeutic potential
In a newly described Drosophila model, two of the five antiepileptic drugs (AEDs) tested, sodium valproate (NaVP) and levetiracetam (LEV), not ethosuximide (ETH), gabapentin (GBP) and vigabatrin …
Received 14 July 2009 15:23 UTC; Posted 17 July 2009
Posted to: Genetics & Genomics, Neuroscience, Pharmacology, Bioinformatics
Transcriptomic analysis implicates ribosomal and energy metabolic pathways in antiepileptic drug action in a Drosophila model
Mechanisms of long term action of antiepileptic drugs (AEDs), used in treating epilepsy and many other neurological and psychiatric disorders, are poorly understood. Recently, a novel Drosophila tr…
Received 03 July 2009 14:57 UTC; Posted 07 July 2009
Posted to: Genetics & Genomics, Neuroscience, Pharmacology, Bioinformatics
GUDMAP – An Online GenitoUrinary Resource
The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is a consortium of laboratories working to provide the scientific and medical community with gene expression data and tools to facil…
Received 29 May 2009 13:53 UTC; Posted 30 May 2009
Posted to: Developmental Biology, Genetics & Genomics, Bioinformatics
The Gene Ontology Annotation (GOA) Database
The Gene Ontology (GO) is a well-established, structured vocabulary that has been successfully used for 10 years in the annotation of proteins. GO terms, created in consultation with the biology co…
Received 23 April 2009 10:42 UTC; Posted 23 April 2009
Posted to: Genetics & Genomics, Bioinformatics
Data submission and curation for caArray, a standard based microarray data repository system
caArray is an open-source, open development, web and programmatically accessible array data management system developed at National Cancer Institute. It was developed to support the exchange of arr…
Received 22 April 2009 14:16 UTC; Posted 22 April 2009
Posted to: Cancer, Bioinformatics
Evaluation of diversity, specialization, and gene specificity in transcriptomes
The transcriptome is a set of genes transcribed in a given tissue under specific conditions and can be characterized by a list of genes with their corresponding frequencies of transcription. Transc…
Received 31 March 2009 19:17 UTC; Posted 02 April 2009
Posted to: Genetics & Genomics, Bioinformatics
Far-infrared rays control prostate cancer cells in vitro and in vivo
We introduce a new effective method to control hormone refractory prostate cancer cells by using an activated rubber/resin form (RB), far-infrared ray emitter, with or without sodium butyrate (SB)....
Received 20 March 2009 07:15 UTC; Posted 20 March 2009
Posted to: Cancer
Analysis of Endocrine Disruption in Southern California Coastal Fish using an Aquatic Multi-Species Microarray
BACKGROUND: Endocrine disruptors include plasticizers, pesticides, detergents and pharmaceuticals. Turbot and other flatfish are used to characterize the presence of chemicals in the marine envir…
Received 28 January 2009 02:08 UTC; Posted 02 February 2009
Posted to: Developmental Biology, Ecology, Genetics & Genomics, Earth & Environment
