Bioinformatics
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Enhanced display of scientific articles using extended metadata
Although the Web has transformed science publishing, scientific papers themselves are still essentially “black boxes”, with much of their content intended for human readers only. Typically, comput…
Received 24 April 2009 16:36 UTC; Posted 24 April 2009
Posted to: Ecology, Bioinformatics, Evolutionary Biology
MitoWheel, visualizing the human mitochondrial genome
So far researchers, web users were restricted to non-intuitive and visually poor text based databases every time they wanted to take a look on the mitochondrial DNA and find a region of interest. B…
Received 07 May 2009 14:40 UTC; Posted 07 May 2009
Posted to: Genetics & Genomics, Bioinformatics
Minimal Information About Sample Preparation for Phosphoproteomics
This guideline describes parameters and conditions involved in phosphopeptide sample preparation. It covers from the description and preparation of the cells and tissues to the fractionation and sp…
Received 22 April 2009 12:47 UTC; Posted 23 April 2009
Posted to: Bioinformatics
DNA sequences classification and computation scheme based on the symmetry principle
The DNA sequences containing multifarious novel symmetrical structure frequently play crucial role in how genomes work. Here we present a new scheme for understanding the structural features and po…
Received 21 April 2009 14:18 UTC; Posted 23 April 2009
Posted to: Genetics & Genomics, Bioinformatics
Objective dysphonia quantification in vocal fold paralysis: comparing nonlinear with classical measures
Clinical acoustic voice recording analysis is usually performed using classical perturbation measures including jitter, shimmer and noise-to-harmonic ratios. However, restrictive mathematical limit…
Received 20 April 2009 21:20 UTC; Posted 21 April 2009
Posted to: Biotechnology, Bioinformatics
bioGUID: resolving, discovering, and minting identifiers for biodiversity informatics
Linking together the data of interest to biodiversity researchers (including specimen records, images, taxonomic names, and DNA sequences) requires services that can mint, resolve, and discover glo…
Received 17 April 2009 17:21 UTC; Posted 17 April 2009
Posted to: Bioinformatics
Visualization of the Phosphoproteomic Data from AfCS with the Google Motion Chart Gadget
Results from multivariate molecular biological experiments become increasingly complex. Hence, the challenge of projecting high-dimensional data onto few dimensions for effective data visualization…
Received 16 April 2009 15:39 UTC; Posted 16 April 2009
Posted to: Biotechnology, Molecular Cell Biology, Bioinformatics
Modularity maps reveal community structure in the resting human brain
The brain is a complex network of interconnecting neurons that combines regional specificity with distributed processing. Recent advances in the field of network theory have facilitated ground-brea…
Received 15 April 2009 16:26 UTC; Posted 17 April 2009
Posted to: Neuroscience, Bioinformatics
Minimum Information about a Neuroscience Investigation (MINI): Electrophysiology
This module represents the formalised opinion of the authors and the CARMEN consortium, which identifies the minimum information required to report the use of electrophysiology in a neuroscience st…
Received 09 April 2009 10:35 UTC; Posted 09 April 2009
Posted to: Neuroscience, Bioinformatics
Dogs Never Gets Prion Diseases. The Entropic Landscape Analysis of Prion Proteins Answers Why.
The Entropic Landscape Analysis was applied to the prion protein sequences of various mammals in order to detect potential sites of variants that would be responsible for the susceptibility of prio…
Received 08 April 2009 10:27 UTC; Posted 09 April 2009
Posted to: Genetics & Genomics, Neuroscience, Bioinformatics, Evolutionary Biology
