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VO: Vaccine Ontology

Yongqun He¹, Lindsay Cowell², Alexander D. Diehl³, Harry Mobley¹, Bjoern Peters⁴, Alan Ruttenberg⁵, Richard H. Scheuermann⁶, Ryan R. Brinkman⁷, Melanie Courtot⁷, Chris Mungall⁸, Zuoshuang Xiang ¹, Fang Chen¹, Thomas Todd ¹, Lesley Colby ¹, Howard Rush¹, Trish Whetzel ⁹, Mark A. Musen⁹, Brian D. Athey ¹, Gilbert S. Omenn¹ & Barry Smith¹⁰

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1. University of Michigan, Ann Arbor, MI 48109, USA
2. Duke University, Durham, NC 27710, USA
3. Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME 04605, USA
4. La Jolla Institute for Allergy and Immunology, La Jolla, CA 92037, USA
5. Science Commons, Cambridge, MA, USA
6. U.T. Southwestern Medical Center, Dallas, TX 75390-9072, USA
7. BC Cancer Agency, 675 West 10th Avenue, Vancouver, BC, Canada
8. Lawrence Berkeley National Laboratory, Berkeley CA, USA
9. Stanford University, Stanford, CA 94305, USA
10. University at Buffalo, Buffalo, NY 14260, USA

DOC (66 KB) PDF (99.7 KB)

Document Type:

Manuscript

Date:

Received 05 August 2009 16:39 UTC; Posted 05 August 2009

Subjects:

Immunology, Microbiology, Bioinformatics

Tags:

• Vaccine Ontology
• ontology
• Infectious disease
• VO

Abstract:

The collaborative, community-based Vaccine Ontology (VO) was developed to promote vaccine data standardization, integration, and computer-assisted reasoning. Currently VO covers a variety of aspects of the vaccine domain, with an emphasis on classification of vaccines and vaccine components, and on host immune response to vaccines. VO can be used for a number of applications, e.g., ontology-based vaccine literature mining through collaboration with the National Center for Integrative Biomedical Informatics (NCIBI).

Collection:

International Conference on Biomedical Ontology

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This document is licensed to the public under the Creative Commons Attribution 3.0 License

How to cite this document:

He, Yongqun, Cowell, Lindsay, Diehl, Alexander , Mobley, Harry , Peters, Bjoern , Ruttenberg, Alan , Scheuermann, Richard , Brinkman, Ryan, Courtot, Melanie , Mungall, Chris, Xiang , Zuoshuang , Chen, Fang, Todd , Thomas , Colby , Lesley , Rush, Howard , Whetzel , Trish , Musen, Mark , Athey , Brian , Omenn, Gilbert , and Smith, Barry . VO: Vaccine Ontology. Available from Nature Precedings <http://dx.doi.org/10.1038/npre.2009.3553.1> (2009)

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